VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Jul 26 2007 - 16:20:50 CDT

Irene,
  The residue_rmsd.tcl script is part of the NAMD tutorial, available
online here:
  http://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-files/2-1-rmsd/

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Jul 26, 2007 at 11:17:46AM -1000, Irene Newhouse wrote:
>
> rmsd-fullthrottle is there - that's where I got it - but the script residue_rmsd.tcl, without which it will not run, isn't. That's what I'm missing. Sorry I wasn't clear about it. [Or maybe that's not what I'm missing. The point is, if I try to run rmsd-fullthrottle.tcl from a Tk console in VMD, it crashes. I looked in the archive & what worked for others was getting residue_rmsd.tcl, but I didn't find where to get it].
>
> Thanks!
> Irene
>
>
>
>
> ----------------------------------------
> > Date: Thu, 26 Jul 2007 12:42:11 -0500
> > From: johns_at_ks.uiuc.edu
> > To: einew_at_hotmail.com
> > CC: vmd-l_at_ks.uiuc.edu
> > Subject: Re: vmd-l: residue_rmsd.tcl
> >
> >
> > Hi,
> > It's included in the VMD tutorial, here's an online copy of
> > the VMD tutorial files, (see the script about halfway down the list..):
> > http://www.ks.uiuc.edu/Training/Tutorials/vmd/vmd-tutorial-files/
> >
> > Cheers,
> > John Stone
> > vmd_at_ks.uiuc.edu
> >
> >
> > On Thu, Jul 26, 2007 at 07:37:51AM -1000, Irene Newhouse wrote:
> > >
> > > I'd love to use rmsd-fullthrottle.tcl, but I can seem to find residue_rmsd.tcl or a listing thereof anywhere with google. It's not in the VMD tutorial tarball - I just downloaded it & checked.
> > >
> > > Thanks!
> > > Irene Newhouse
> > > _________________________________________________________________
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> > --
> > NIH Resource for Macromolecular Modeling and Bioinformatics
> > Beckman Institute for Advanced Science and Technology
> > University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> > Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> > WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
>
> _________________________________________________________________
> Missed the show?  Watch videos of the Live Earth Concert on MSN.
> http://liveearth.msn.com 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078