VMD-L Mailing List

From: Irene Newhouse (einew_at_hotmail.com)
Date: Thu Jul 26 2007 - 16:29:55 CDT

Thank you so much!
Irene

----------------------------------------
> Date: Thu, 26 Jul 2007 16:20:50 -0500
> From: johns_at_ks.uiuc.edu
> To: einew_at_hotmail.com
> CC: vmd-l_at_ks.uiuc.edu
> Subject: Re: vmd-l: residue_rmsd.tcl
>
>
> Irene,
> The residue_rmsd.tcl script is part of the NAMD tutorial, available
> online here:
> http://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-files/2-1-rmsd/
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Thu, Jul 26, 2007 at 11:17:46AM -1000, Irene Newhouse wrote:
> >
> > rmsd-fullthrottle is there - that's where I got it - but the script residue_rmsd.tcl, without which it will not run, isn't. That's what I'm missing. Sorry I wasn't clear about it. [Or maybe that's not what I'm missing. The point is, if I try to run rmsd-fullthrottle.tcl from a Tk console in VMD, it crashes. I looked in the archive & what worked for others was getting residue_rmsd.tcl, but I didn't find where to get it].
> >
> > Thanks!
> > Irene
> >
> >
> >
> >
> > ----------------------------------------
> > > Date: Thu, 26 Jul 2007 12:42:11 -0500
> > > From: johns_at_ks.uiuc.edu
> > > To: einew_at_hotmail.com
> > > CC: vmd-l_at_ks.uiuc.edu
> > > Subject: Re: vmd-l: residue_rmsd.tcl
> > >
> > >
> > > Hi,
> > > It's included in the VMD tutorial, here's an online copy of
> > > the VMD tutorial files, (see the script about halfway down the list..):
> > > http://www.ks.uiuc.edu/Training/Tutorials/vmd/vmd-tutorial-files/
> > >
> > > Cheers,
> > > John Stone
> > > vmd_at_ks.uiuc.edu
> > >
> > >
> > > On Thu, Jul 26, 2007 at 07:37:51AM -1000, Irene Newhouse wrote:
> > > >
> > > > I'd love to use rmsd-fullthrottle.tcl, but I can seem to find residue_rmsd.tcl or a listing thereof anywhere with google. It's not in the VMD tutorial tarball - I just downloaded it & checked.
> > > >
> > > > Thanks!
> > > > Irene Newhouse
> > > > _________________________________________________________________
> > > > Missed the show? Watch videos of the Live Earth Concert on MSN.
> > > > http://liveearth.msn.com
> > >
> > > --
> > > NIH Resource for Macromolecular Modeling and Bioinformatics
> > > Beckman Institute for Advanced Science and Technology
> > > University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> > > Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> > > WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
> >
> > _________________________________________________________________
> > Missed the show? Watch videos of the Live Earth Concert on MSN.
> > http://liveearth.msn.com
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078

_________________________________________________________________
PC Magazine’s 2007 editors’ choice for best web mail—award-winning Windows Live Hotmail.
http://imagine-windowslive.com/hotmail/?locale=en-us&ocid=TXT_TAGHM_migration_HMWL_mini_pcmag_0707