VMD-L Mailing List

From: snoze pa (snoze.pa_at_gmail.com)
Date: Mon Feb 27 2006 - 11:30:08 CST

Hi John,
 I am new in tcl scripting. Could you sueegst me how to use this script, I
mean with one example.
thanks in advance
snoze

On 2/23/06, John Stone <johns_at_ks.uiuc.edu> wrote:
>
>
> Take a look at the PBCTools and PBCWrap scripts, they should help you
> with this:
> http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/pbctools/
> http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/pbcwrap/
>
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Thu, Feb 23, 2006 at 02:47:52PM -0500, snoze pa wrote:
> > Dear VMD users,
> > I am new in this mailing list and i have few questions. I am doing namd
> > simulation and find that my water box size is increasing in one
> direction
> > while it is shrinking in other direction. Mark suggest me to check it
> with
> > vmd if anyone has written a display script that displays a system in
> the
> > original pbc cell.
> > thanks in advance
> > snoze
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
>