VMD-L Mailing List

From: lily jin (lily1907_at_yahoo.com)
Date: Fri Feb 10 2006 - 17:07:13 CST

Hi,
  
  When I add water box on the protein by using 'solvate' I miss the information about the coordinates of the two points, which I will use in the later .conf file.
  
  When I run 'solvate', it should be finish like:
  
  Info: writing pdb file F1_ATP_in_beta_EMPTY_betadp_from_36656_WB.pdb
  Info: pdb file complete.
  Solvate 1.2 completed successfully.
  {5.14699935913 -2.42300033569 1.57500076294} {187.867996216 142.183998108 153.92199707}
  
  However, don't have the last line. It is like:
  Info: writing pdb file 1woj_test_wb.pdb
  Info: pdb file complete.
  Solvate 1.2 completed successfully.
>Main< (work) 27 %
  
  Where else can I have the information? What might be the problem?
  
  Thanks!
  
  Lixia
  
                
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