VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Feb 03 2006 - 12:42:49 CST

Osmany,
  It sounds to me like you're really wanting to build a combined
structure, in which case you'll likely want to use the psfgen plugin.
Another way to do that that's more hackish but probably easier to try
initially is to use PDBCat, since you didn't say you needed a psf file:
  http://www.ks.uiuc.edu/Development/MDTools/pdbcat/

  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Feb 03, 2006 at 02:37:47PM -0400, Osmany Guirola Cruz wrote:
> Hi people
> this is my problem....
> i have 2 pdbs 1.pdb and 2.pdb ..i loaded them with vmd ..then i move
> protein 2 with "commands"(tkconsole window) and put it in the position
> that i want...in this situation i can save the protein 2 to a pdb file
> but i want save both structures 1 and 2 together with the new positions
> in one pdb file. How can i do this
> Thanks
>
> Osmany 

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NIH Resource for Macromolecular Modeling and Bioinformatics
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