Membrane protein

From: SHEYLA ESTHER CARMEN SIFUENTES (sheyla.carmen_at_unmsm.edu.pe)
Date: Tue May 18 2021 - 22:48:47 CDT

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Hi guys
I have made a dynamic of a membrane protein, however almost all the
simulation goes to the end of the box, I have already tried to center it
with the pcb commands, however it is not centered, I think it is a problem
of my simulation, I do not know if at all In case I have to change
parameters, it is a protein in a membrane only with POPC, I gave it 10 ns
of equilibration, I do not know if in any case I better add other lipids to
the membrane, it should equilibrate it longer, or there is some kind of
restriction that can be added in these cases, I hope you can help me.
Regards
Sheyla

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