Showing posts with label Discovery Institute. Show all posts
Showing posts with label Discovery Institute. Show all posts

Saturday, May 26, 2012

The Discovery Institute Gets a New "Expert"

I have to admit, I find it amazing how desperate the Dishonesty Institute folks are. They're willing to join forces with almost any nonentity, no matter how irrelevant their "expertise", if they toe the "evolution is a hoax and Darwinism is Nazism" party line. I mean, how else can you explain their fascination with David Klinghoffer? Casey Luskin? James Barham? John West? Not exactly Nobel Prize winners there, if you see what I mean.

Of course, their big tent has its limits. Michael Egnor got in a few columns at News & Views, but he's been quiet since this one. Even the Discovery Institute, it appears, has limits on the kind of nonsense they're willing to put up with.

Now they've got a new "expert" on their team: Stephen A. Batzer. Batzer is, at least judging from his cv, the person I might turn to if I wanted someone to give me a "review of recent glazing literature". But the theory of evolution? Not so much.

Here is Batzer's analysis of Sims' famous evolutionary simulation of locomotion strategies: "This program is modeling a very simplistic random search algorithm to produce an output, like a radar searching for an aircraft, or a robo-call computer punching out all the numbers inside of one area code, looking for a mark. The information, process, and therefore success have all been pre-loaded." I mean, you have to really work at it to miss the mark this much.

Congrats, Dishonesty Institute! You and Prof. Batzer deserve each other.

Saturday, February 11, 2012

More Evidence that ID Isn't Science

Are you a young religious fundamentalist who feels threatened by the theory of evolution? Then this summer program run by the Dishonesty Institute may be right for you!

Of course, you'll need to prove that you are devoted to the Truth. That's why you'll need a "recommendation from a professor who knows your work and is friendly toward ID, or a phone interview with the seminar director."

Copy here, for when it disappears down the DI memory hole:



Yes, that's exactly how real science works. I remember well when I wanted to study theoretical computer science at Berkeley: one of the requirements was that I get a recommendation from someone who knew my work and was friendly toward computational complexity.

Not.

I mean, could it be any plainer that ID is a religious and political movement? It's just like when politicians set up "free speech zones" to keep out protesters, or when creationist organizations demand statements of faith.

No real scientific organization demands a "statement of faith" or that applicants to educational programs be "friendly" to the prevailing view. That kind of stuff is reserved for areas where questioning the evidence is not tolerated -- like intelligent design.

Tuesday, December 06, 2011

A Discovery Institute Flack Responds

Oh, look! The Discovery Institute flack Jonathan McLatchie has responded with a barely literate screed.

In addition to his charming mangling of English grammar and the spelling of my name, he asks, "Does Shallit really think that we haven't heard of processes such as genetic drift and endosymbiosis?"

Well, I bet McLatchie has, since he seems to have studied some biology. But I wasn't talking about McLatchie, as is clear from my text. Johnson, when the video was shot back in 1993, apparently didn't know a damn thing about drift - and that was the issue I was addressing. McLatchie tries to switch attention from Johnson in 1993 to all ID advocates today. Nice try at misdirection, Jonathan!

McLatchie goes on to claim, "I'm sure Phillip Johnson is aptly aware of the various kinds of selective process: balancing selection, stabilizing selection, disruptive selection, directional selection to name just a few."

Then why did Johnson lie and claim selection could not produce change? And why did he claim natural selection acted to preserve neutral mutations? No, it's clear Johnson was just being pig-ignorant. And McLatchie thinks it's just peachy. Why any Christians would want to be associated with such dishonesty is beyond me. But as we all know, it's just fine to lie for Jeebus.

Friday, May 28, 2010

Casey Luskin: Information Theory Expert

Well, it looks like the Discovery Institute was so unnerved by my pointing out the misunderstandings and misrepresentations in Stephen Meyer's book, Signature in the Cell, that they devoted two whole chapters to attacking me in their new book. The always-repulsive David Klinghoffer called me a "pygmy" and made fun of the name of my university (page 6). Paul Nelson called my critique a "fluffy confection" and alleged I was guilty of "sophistry". Casey Luskin said I indulged in "gratuitous invective".

The DI's responses to my arguments about Signature are about at the level of what you'd expect from them. I already replied to Paul Nelson months ago here, but of course they didn't see fit to reference that.

In their new book, they trot out lawyer Casey Luskin as their new expert on information theory. Luskin's main points are

(1) Shannon and Kolmogorov complexity are not "useful metrics of functional biological information" and
(2) eminent scientists have adopted Dembski and Meyer's notion of "functional information".

Here's my response:

(1) No measure of information is perfect. Both Shannon and Kolmogorov have proved useful in biological contexts; to claim, as Luskin does that they are "outmoded tools" is ridiculous. An exercise for Luskin, or anyone else: do a search of the scientific literature for "Shannon information" in biology, and count how many hits you get. Now do the same thing for "functional information". See the difference?

Indeed, it is the apparent incompressibility of the genome that suggests, through Kolmogorov complexity, that random mutations played a very significant role in its creation.

(2) Luskin cites a 1973 book by Orgel, where Orgel used the term "specified complexity", as evidence that creationist information is used by real scientists. However, Orgel did not give a rigorous definition of the term, and no one has since then. The term was only used in a popular book, and Orgel never published a definition in the peer-reviewed scientific literature. Dembski later claimed that Orgel's term was the same as his, and Luskin now repeats this falsehood. A lie can travel around the world, while the truth is just lacing up its sneakers.

Luskin points out that very recently, Szostak has introduced a notion of "functional information". However, Szostak's "functional information" is not a general-purpose measure of information. It certainly does not obey the axioms of information as studied by information theorists, and it does not obey Dembski's "law of conservation of information". Furthermore, it is only defined relative to a set of functions that one specifies. Change the functions, and you might get a completely different measure. So it is clear that Szostak's measure is not the same as Dembski's.

Might Szostak's idea prove useful one day? Perhaps, although the jury is still out. It has yet to receive many citations in the scientific literature; one of the papers cited by Luskin is by creationist Kirk Durston. The last time I looked, Durston's paper had essentially no impact at all, to judge by citation counts.

In any event, my claim was "Information scientists do not speak about ‘specified information’ or ‘functional information.’” Luskin offers Szostak as a counterexample. But Szostak is not an information scientist; he's a biologist. No discussion of "functional information" has yet appeared in the peer-reviewed information theory literature, which was my point. Luskin's trotting out of Szostak's paper does not refute that.

Thursday, January 14, 2010

More on Signature in the Cell

Yesterday, I showed how the treatment of information in Stephen Meyer's book, Signature in the Cell, contains many misunderstandings and unjustified claims.

Today, I want to focus on what I call the "dishonesty factor" of the book: claims that are misleading or just plain false. The philosopher Thomas Nagel has stated that "Meyer’s book seems to me to be written in good faith." Perhaps, after reading these examples, he might reconsider his assessment.

pp. 1-2: Meyer gives a very misleading account of the events surrounding the dubious publication of his shoddy article in the Proceedings of the Biological Society of Washington (footnotes omitted):

First, in August 2004, a technical journal housed at the Smithsonian Institution in Washington, D.C., called the Proceedings of the Biological Society of Washington published the first peer-reviewed article explicitly advancing the theory of intelligent design in a mainstream scientific periodical. After the publication of the article, the Smithsonian's Museum of Natural History erupted in internal controversy, as scientists angry with the editor -- an evolutionary biologist with two earned Ph.D.'s -- questioned his editorial judgment and demanded his censure. Soon the controversy spilled over into the scientific press as news stories about the article and editor's decision appeared in Science, Nature, The Scientist, and the Chronicle of Higher Education.

The media exposure fueled further embarrassment at the Smithsonian, resulting in a second wave of recriminations. The editor, Richard Sternberg, lost his office and his access to scientific samples and was later transferred to a hostile supervisor. After Sternberg's case was investigated by the U.S. Office of Special Counsel, a government watchdog organization, and by the U.S. House Committee on Government Reform, a congressional committee, other questionable actions came to light. Both investigations bound that senior administrators at the museum had interrogated Sternberg's colleagues about Sternberg's religious and political beliefs and fomented a misinformation campaign designed to damage his scientific reputation and encourage his resignation. Sternberg did not resign his research appointment, but he was eventually demoted.


This account is misleading in almost every respect. For the true story, you can consult Ed Brayton's fine article in The Skeptic. Here are some facts that Meyer saw fit to omit:

1. Sternberg arguably engaged in misconduct in publishing the article. The council of the Biological Society of Washington, publishers of the journal, issued a statement saying that "the associate editors would have deemed the paper inappropriate for the pages of the Proceedings because the subject matter represents such a significant departure from the nearly purely systematic content for which this journal has been known throughout its 122-year history" and "Contrary to typical editorial practices, the paper was published without review by any associate editor; Sternberg handled the entire review process." As Brayton argues, "Sternberg’s decision to publish the paper without the normal peer-review process is a flagrant breach of professional ethics that brought disrepute to the Smithsonian."

2. Meyer's claims about retaliation against Sternberg are bogus. Before the controversy and before the article was published, Sternberg (who only held a courtesy appointment at the Smithsonian and was not employed by them) and others were informed about a reorganization of the department that would require a change of offices. Sternberg later was moved again because he requested the move. It is a falsehood to claim he lost his office as a result of retaliation.

3. There was no campaign against Sternberg. His misconduct in publishing the article was discussed - as it should have been - but ultimately no action was taken. No one was "interrogated".

Let's go on to see other misrepresentations in Signature in the Cell:

p. 5: Meyer overstates the impact of Dembski's work by calling it "groundbreaking". Falsely claims Dembski "established a scientific method for distinguishing the effects of intelligence from the effects of undirected natural processes. His work established rigorous indicators of intelligent design..."

This is in line with the usual tactic of creationists: credential inflation. Dembski's work has received a minuscule number of citations in the scientific literature, while truly important work typically receives hundreds or thousands of citations. So in what sense can Dembski's work fairly be considered "groundbreaking"?

Similar credential inflation can be found on pages 178-9, where Meyer says of one of Dembski's articles that it "broke important new ground in understanding pattern recognition." Yet the pattern recognition literature has somehow ignored this "important new ground".

p. 36: Victorian scientists viewed cells as " "homogeneous and structureless globules of protoplasm," amorphous sacs of chemical jelly, not intricate structures of manifesting the appearance of design."

This claim has been repeated again and again by creationists, but it is not true. Fergodsake, the nucleus was discovered in 1833. Here are more detailed rebuttals by Afarensis and Wesley Elsberry.

p. 120: [About the movie Expelled] "When the producers came to our offices to plan interviews, the told us they wanted to find a way to represent what DNA does visually, so that a genera audience could follow the scientific discussion they planned to incorporate into the film. They commissioned a visually stunning three-dimensional animation of DNA and the inner workings of the cell and retained a team of molecular biologists to work closely with the animators."

Somehow Meyer manages to leave out the inconvenient fact that their "visually stunning" animation of the "inner workings of the cell" was ripped off from XVIVO's Inner Life of the Cell.

I could cite even more examples, but this is enough to give the general idea. Whether it's about the technical details of information theory, or the more prosaic details of controversies, Meyer's accounts simply cannot be relied upon.

Tuesday, January 05, 2010

Discovery Institute Busted

It seems the clowns at the Discovery Institute just can't stand being criticized - so much so that they issued a bogus DMCA takedown notice on a youtube video. The DI says it's all about the unauthorized use of their logo, and they say they don't "contest right [sic] of this user to publish satire, parody, or criticism", but that's about as believable as their other claims.

Friday, November 27, 2009

Discovery Institute Fellow Accused of Making Stuff Up

And in a really huge surprise, a fellow of the Discovery Dishonesty Institute, Benjamin Wiker, is accused by a young-earth creationist of making stuff up.

Why, I am simply speechless!

To be fair, Wiker has a Ph. D. in "theological ethics". You know, as distinguished from real ethics, where fibbing is considered to be in bad taste.

Sunday, November 15, 2009

Phony Calls for "Civility"

You know a call for "more civility" is completely phony when the person who issues it only cites examples from one side of the debate.

That's the case with this recent opinion piece by Casey Luskin, spokesman for the Discovery Institute.

Luskin lists three examples of incivility, and all of them are from the pro-science, anti-creationist side. He fails to cite a single example of incivility from a creationist, even though there are many examples to choose from. As Wesley Elsberry has documented, Luskin's friends routinely compare evolutionary biologists to Nazis, communists, the Taliban, and Satan. Luskin himself has labeled materialists an "ominous force" that will "consume" people. William Dembski proudly sponsored an animation that used fart noises to make fun of Judge Jones, who decided the Kitzmiller v. Dover case.

No one is going to be fooled by this dishonest posturing.

Wednesday, April 30, 2008

Mystery Noise Investigation Enrages Discovery Institute

Take a look at at this article about a mystery noise that's been annoying neighbors in Pikesville, Maryland.

Residents reported explosions and flashes of light in the middle of the night. They reported the noise to the police, who seemed skeptical until they captured it on video. According to the article,

"Whatever it is there's a scientific explanation," said Johns Hopkins University Physicist Dr. Peter Armitage, who reviewed the video tape evidence and went to the neighborhood where it's happening to see if he could find any possible causes.

Armitage says more evidence is needed before he can form a scientific conclusion.


and


[Bonnie] Friedman agrees. "We even said maybe it's aliens. We're at the point where we'll listen to anyone's theory. We just need to stop it because my homeowners need to sleep."


This has apparently enraged the Discovery Institute. Spokesman John West said, "Scientific materialism--the claim that everything in the universe can be fully explained by science as the products of unintelligent matter and energy--has become the operating assumption for much of American politics and culture." He took issue with Armitage's claim that the noise and light must have a scientific explanation: "Although this line of reasoning exhibits a surface persuasiveness, it ignores the natural limits of scientific expertise... If the history of scientific materialism in politics shows anything, it is that scientific experts can be as fallible as any one else."

Biologist Jonathan Wells thinks Bonnie Friedman is not being fair by considering aliens as a valid explanation, but not God: "Probably everyone would concede that attributing design to space aliens doesn’t ultimately solve the problem; it just moves the solution further away.... Why not God?"

Sounds pretty convincing to me. I don't know why the Baltimore County police aren't considering the possibility that this sound-and-light show is supernatural. After all, the Bible tells us that God intervenes all the time in human affairs. Why not in Pikesville, Maryland?

Oops.

[All quotes from DI spokesmen are genuine, although they have been taken out of context for comic purposes.]

Tuesday, September 11, 2007

Aww. Michael Egnor Notices Me

Well, I see that physician and Discovery Institute shill Michael Egnor has noticed me.

Egnor, a man whose arrogance and ignorance has already led to the coining of a new word, is unhappy about my critique of Tom Bethell. So unhappy, in fact, that he has to resort to forging fake quotes from my article.

Egnor claims that I called Bethell "a liar" - he uses those two words, and puts them in quotes. Any reasonable person would come to the conclusion that they appear in my article. Only problem is, the word "liar" doesn't appear anywhere in my piece, as a text search will easily confirm. Gee, a Discovery Institute spokesman misleading the public - what is the world coming to?

What I said was, "Bethell then goes on to repeat a common lie of the intelligent design movement..." Repeating a lie doesn't necessarily make one a liar; it is possible to repeat a lie from sheer ignorance.

Next, Egnor misrepresents the thrust of my observation about SETI. Egnor says, "Professor Shallit ridicules Bethell’s observation that Search for Extraterrestrial Intelligence (S.E.T.I.) research demonstrates that, under appropriate circumstances, the scientific inference to intelligent design in nature can be a legitimate interpretation of data." Actually, I did nothing of the sort. If we were to receive a coded message from outer space reading "Welcome earthlings! We are your reptilian overlords. Submit or be absorbed!", I would gladly join the hordes defending our beloved planet from invaders.

What I actually was objecting to - and it would be clear to anyone with connected brain cells - was Bethell's false claim that the people at SETI carry out their objectives by looking for "such things as a sequence of prime numbers". They don't look for prime numbers at all, as I showed by quoting directly from the SETI web pages.

Egnor makes the false claim that Bethell was just using an example from the fictional movie Contact. Although prime numbers do appear in Contact, Bethell said nothing at all about that movie, as a simple text search of Bethell's article will show. Bethell's claim was about what SETI researchers actually do; his claim was incorrect, and Egnor still doesn't understand why.

I find it strange that Egnor, a medical doctor, would defend Bethell, a man whose command of science is so unhinged that he has problems with relativity and thinks there is no AIDS epidemic in Africa.

Addendum: there's also a delicious irony involved in Egnor's post. The DI and intelligent design proponents are always whining about how legitimate scientists want to shut down debate about ID. Egnor's post, however, is on a web log that doesn't allow comments. The Panda's Thumb and Recursivity, by contrast, permit and encourage comments. Who, really, wants debate?