A fast image processing library with low memory needs.
C
Updated Aug 21, 2019
AMI Medical Imaging (AMI) JS ToolKit
JavaScript
Updated Jul 4, 2019
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
C++
Updated Aug 7, 2019
3D image classification using CNN (Convolutional Neural Network)
Python
Updated Feb 16, 2019
Connectome Workbench
C++
Updated Aug 14, 2019
Julia module for reading/writing NIfTI MRI files
Julia
Updated Jul 15, 2019
This is the repository for the BioImage Suite Web Project
JavaScript
Updated Aug 22, 2019
pytorch dataset class for reading and transforming NIfTI files
Jupyter Notebook
Updated Aug 22, 2019
Maps source-level neuroimaging data onto a BIDS data structure
Python
Updated Aug 22, 2019
Biomedical Visualization and Analysis Framework
Python
Updated Aug 20, 2019
Processing and visualization tools for quantitative MRI data
Mathematica
Updated Jul 26, 2019
OSX XCode GLSL Volume Render for NIfTI, Bio-Rad Pic, NRRD, Philips, ITK MetaImage, AFNI, Freesurfer, DICOM images.
C++
Updated Aug 3, 2019
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files
C++
Updated Apr 1, 2019
Rust implementation of the NIfTI-1 format
Rust
Updated Aug 21, 2019
Convert data from Bruker to DICOM and from DICOM to NIfTI
Python
Updated Apr 30, 2019
🖼 A lightweight neuroimaging .nii to .png converter for Matlab and Python users
MATLAB
Updated Jun 14, 2019
Stanford open modules for python
Python
Updated Dec 11, 2017
This project contains scripts to extract metadata from DICOM files, NIFTI files and spreadsheets, and import them int…
Python
Updated Jul 31, 2018
Simple, stream-based NIfTI-1 reader in JavaScript
TypeScript
Updated Jul 20, 2016
DAGs adapting the MRI preprocessing pipeline to Airflow
Python
Updated Feb 5, 2018
Simple script to transform 3D nifti files to fancy gifs
Python
Updated Nov 30, 2018
Nifticlib is a C I/O library for reading and writing files in the nifti-1 data format. nifti-1 is a binary file forma…
C
Updated Jul 25, 2017
display NIfTI/Minc volume along with MNIobj mesh using webgl, threeJS and javascript
JavaScript
Updated Nov 20, 2017
A basic library for reading, writing and manipulating NIfTI files.
C#
Updated Jun 26, 2019
MATLAB
Updated Sep 19, 2017
MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness
A 3D Slicer Module that 1. uses ROBEX brain extraction to generate mesh.obj; 2. tumor label mask to mesh.obj
Python
Updated Nov 23, 2018
Helpful scripts that I've repeatedly used
Python
Updated Nov 29, 2017
Convolutional Neural Networks for Cardiac Segmentation
Python
Updated Sep 13, 2017