VMD-L Mailing List

From: snoze pa (snoze.pa_at_gmail.com)
Date: Fri Jul 20 2007 - 12:42:18 CDT

Dear VMD users,
 I found autopsf very useful. I have a ligand for which partial information
is already known in charmm parameter
and topology file. How can i use autopsf to complete the task. How to load
the partial charmm parameter/top file
 inside vmd autopsf. Is there any detail tutorial how create psf file for
logand. I check it in vmd website but didn't
find a tutorial. It will be great of you can provide one such tutorial.
thanks in advance