VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Jul 12 2007 - 16:57:22 CDT

Hi,
  Have you tried synthesizing a density map using the VolMap plugin?
You can run it via:
  Extensions->Analysis->VolMap Tool

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Jul 12, 2007 at 10:37:18PM +0100, Emmanuel Levy wrote:
> Dear all,
>
> I would like to illustrate what sort of surfaces cryo-EM allows to
> see. So I would like to generate a rough surface with VMD. However
> increasing the probe size doesn't look too good.
>
> Any idea on how best to do this would be very welcome!
>
> Thanks very much,
>
> Emmanuel 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078