VMD-L Mailing List

From: Luis Gracia (lug2002_at_med.cornell.edu)
Date: Thu May 04 2006 - 08:14:27 CDT

Hi, I normally use R or plotmtv to plot this kind of data. If you are
more interested in mapping the data to 3D structures in VMD you might be
interested in the iTrajComp plugin, which right now can handle data in
which x and y represent frames, atoms or residues.

http://physiology.med.cornell.edu/faculty/hweinstein/vmdplugins/itrajcomp/

Best

Luis

Luis Gracia, PhD
Department of Physiology & Biophysics
Weill Medical College of Cornell University
1300 York Avenue, Box 75
New York, NY 10021

Tel: (212) 746-6375
Fax: (212) 746-8690
lug2002_at_med.cornell.edu

Prof. Y. U. Sasidhar said the following on 05/04/06 03:14:
> I have a set of x y z data. I want to see these points in 3D to locate
> regions where the points are more dense etc. I am also interested in iso
> surface plots of point density. Can this be done in VMD ?