VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_vitae.cmm.upenn.edu)
Date: Wed Jan 25 2006 - 10:52:41 CST

On Wed, 25 Jan 2006, Vineet Pande wrote:

VP> Hi,
VP> I am trying to load a CHARMM trajectory (after merging
VP> smaller chunks and recentering solvent), but VMD
VP> (version 1.8.4b6) gives an error message saying- Error
VP> opening file: improperly formatted line. The number of
VP> atoms in my system are 107295 and the size of the PBC
VP> trajectory is around 2GB. When I load similar file
VP> without solvent and PBCs, it works fine. Does it have
VP> anthing to do with size limits?

please have a look at the mailing list archives for (rather
frequent!) discussions of similar problems and please provide
some more info (operating system, hardware specs, did it work
with older, non-beta versions of the code?).

regards,
    axel.

VP>
VP> Thanks in advance,
VP> Vineet Pande
VP> Karolinska Institute, Stockholm
VP>
VP>
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-- 
=======================================================================
Axel Kohlmeyer   akohlmey_at_cmm.chem.upenn.edu   http://www.cmm.upenn.edu
   Center for Molecular Modeling   --   University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582,  fax: 1-215-573-6233,  office-tel: 1-215-898-5425
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If you make something idiot-proof, the universe creates a better idiot.