VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Mar 08 2005 - 10:59:25 CST

Hi,
  I don't know what the problem would be off the top of my head,
one thing to try would be to run this command and see what it says:
  ldd /usr/local/lib/vmd/plugins/LINUX/tcl/intersurf1.0/bin/intersurf.so

  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Mar 07, 2005 at 07:02:11PM +0100, Jérôme Hénin wrote:
> Hi Nuno,
>
> I have a box with roughly the same config here, and no problem whatsoever with
> Intersurf.
>
> John, do you see any dependency that could be missing from Nuno's installed
> system?
>
> Jerome
>
> On Monday 07 March 2005 14:40, Nuno R. L. Ferreira wrote:
> > Hi there.
> >
> > I'm running vmd 1.8.3 in a linux box, with Mandrake 10.1 [kernel 2.6.8-1].
> > Sorry for the missing words.
> > Nuno
> >
> > > Hi,
> > > Which platform are you runnin VMD on? (Intersurf should only show up
> > > in the Windows and Linux versions currently...) What version of
> >
> > Windows/Linux
> >
> > > are you actually running? It could be that the shared library plugin for
> > > Intersurf is incompatible with one of your system libraries.
> > >
> > > John Stone
> > > vmd_at_ks.uiuc.edu
> > >
> > > On Sat, Mar 05, 2005 at 01:27:53PM -0000, Nuno R. L. Ferreira wrote:
> > > > Hi
> > > >
> > > > When I start the intersurf visualization plugin from the extension
> > > > menu,
> >
> > I
> >
> > > > get the following error in the console:
> > > >
> > > > vmd > ERROR) Creation of window for 'intersurf' failed.
> > > >
> > > > I'm using the vmd v1.8.3.
> > > > Any help will be most appreciated.
> > > > Regards,
> > > > Nuno
> > > >
> > > > --
> > > > -----------------------------------------------------
> > > > Nuno Ricardo Santos Loureiro da Silva Ferreira
> > > > Ph.D student
> > > > Grupo de Química Biológica
> > > > Departamento de Química
> > > > Faculdade de Ciências e Tecnologia
> > > > Universidade de Coimbra
> > > > 3004-535 Coimbra
> > > > Portugal
> > > > www.biolchem.qui.uc.pt
> > > > -----------------------------------------------------
> > > > \" Do not worry about your dificulties in mathematics.
> > > > I can assure you that mine are still greater.\"
> > > > e=mc2
> > > > -----------------------------------------------------
> > >
> > > --
> > > NIH Resource for Macromolecular Modeling and Bioinformatics
> > > Beckman Institute for Advanced Science and Technology
> > > University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> > > Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> > > WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
>
> --
> Jérôme Hénin
> Equipe de Dynamique des Assemblages Membranaires
> Université Henri Poincaré / CNRS
> Tel : (33) 3 83 68 43 95 Fax : (33) 3 83 68 43 71
> http://www.edam.uhp-nancy.fr/ 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078