VMD-L Mailing List
From: pl (ladam_at_smbh.univ-paris13.fr)
Date: Wed Nov 03 2004 - 10:04:29 CST
- Next message: Adrain Koh: "Converting .txt trajectory files to VMD compatible format"
- Previous message: John Stone: "Re: linux installation"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi all,
I try to write a script that would show H-bonded water molecules to a
solute during a trajectory while water molecules not H-bonded to the
solute (DNA) would be hidden.
So, at some point I need to test if the selected water is effectively H-
bonded with my DNA but can't figure out how to do this. Would dynamic-
bonds be of some help, is there a True/False flag to H-Bonds for atoms
somewhere?
Thank you
-- ------------------------------------------------------------------ | Patrick LADAM | | | Laboratoire CSSB | THE BIG BANG THEORY: | | UFR SMBH | | | 74 rue Marcel Cachin | In the begining there was | | 93017 Bobigny CEDEX | nothing at all. | | >>> NEW e-mail: <<< | | | ladam_at_smbh.smbh.univ-paris13.fr | Then, it exploded... | | Tel: 01 48 38 77 26 / 76 85 | | | Fax: 01 48 38 77 77 | | ------------------------------------------------------------------
- Next message: Adrain Koh: "Converting .txt trajectory files to VMD compatible format"
- Previous message: John Stone: "Re: linux installation"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]