VMD-L Mailing List

From: Luciano (ltcosta_at_universiabrasil.net)
Date: Tue Jul 20 2004 - 13:57:30 CDT

 I read a structure of polymer box (*.xyz file, type Tinker) in other
viewer package, but I had problem with vmd:

 Multithreading available, 1 CPU detected.
Info) OpenGL renderer: Mesa X11
Info) Features: STENCIL RN MTX TCM
Info) Textures: 2-D (2048x2048), 3-D (256x256x1), Multitexture (8)
vmd > Info) Using plugin xyz for structure file peo12.xyz
xyz structure) missing type or coordinate(s) in file 'peo12.xyz' for
atom '1'
ERROR) molecule_structure: Unable to read structure for molecule 0
Info) Using plugin xyz for coordinates from file peo12.xyz
xyz timestep) missing type or coordinate(s) in file 'peo12.xyz' for atom '1'
Info) Finished with coordinate file peo12.xyz.
Info) Analyzing structure ...
Info) Atoms: 85
Info) Residues: 85
Info) Waters: 0
Info) Segments: 0
Info) Fragments: 85 Protein: 0 Nucleic: 0

 What mean this ERROR ?! What do I do, please?!

 thanks in advance!!

   

######################################################
               Luciano Tavares da Costa
             Mestre em Engenharia Química
   icq #232852036 ; ltcosta_at_universiabrasil.net
  Doutorando Laboratório de Espectroscopia Molecular
              Instituto de Química - USP
             
######################################################

-----------------------------------------------------------------------
Universia Brasil. Em todas as fases da vida acadêmica.
Acesse o portal e confira nossos serviços e benefícios:
www.universiabrasil.net