VMD-L Mailing List

From: li (zlee_at_ustc.edu)
Date: Tue Mar 18 2008 - 17:31:26 CDT

thank all:
i have download the trajectory_smooth script and try to find out the average structure of one molecule in waters,but at the same time ,i find that the center of the molecule has  moved ,since it computes the average "postion", does  this moving center  affect the result? 
the same question about rmsd compution.
best wishes!
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