From: 辛志宏 (xzhfood_at_njau.edu.cn)
Date: Fri Nov 12 2021 - 08:35:40 CST
Hello!
An error occured when I run a molecular dynamic using NAMD3,
FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE N238
I don't know how to solve it, any suggestion will be much appreciate.
The following parameters were used,
parameters ./common/par_all36_prot.prm
parameters ./common/par_all36_carb.prm
parameters ./common/par_all36_cgenff.prm
parameters ./common/par_all36_lipid.prm
parameters ./common/par_all36_na.prm
parameters ./common/UNK_DEF6D6.prm
parameters ./common/toppar_water_ions_namd.str
#parameters ./common/toppar_water_ions.mod.str (don't works)
Thanks,
Zhihong xin
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