SMD in lipid

From: Ishaan Roy (royi_at_uchicago.edu)
Date: Fri Sep 24 2021 - 12:01:20 CDT

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Hello,

I am trying to run SMD on a dimerized protein in a lipid membrane. However, with my current settings, the lipid stretches in the direction the protein is pulled (flexibleCell is on) and thins out in the middle. How can I prevent this from occurring?

Thanks,
Ishaan

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