From: Kushal Roy (kushalrajroyfc_at_gmail.com)
Date: Sun Jul 12 2020 - 12:05:21 CDT
Yeah It's true partially because when it finished it finished at
12726000. So when i did catdcd to make the final trajectory such "
abnormal termination error appeared in vmd during loading the dcd file
along with the structure file (.psf). I hope you get my point.
On Sun, 12 Jul, 2020, 6:58 pm Chandni Tiwari, <chandni.tiwari_at_monash.edu>
wrote:
> Hi Kushal,
>
> It seems normal that it started at where you wanted it to start, i.e, 2726000,
> which means restart file worked?
>
> Also, please elaborate on what command did you give for the concatenate?
> what is the error message?
>
> On Sun, 12 Jul 2020 at 21:48, Kushal Roy <kushalrajroyfc_at_gmail.com> wrote:
>
>> Hello Everyone!
>>
>> I was running nvt simulation for 10000000 steps, timesteps 2. i.e. 20ns
>> During the simulation first dcd file got interupted so I have to restart
>> again.My first Generated DCD file was 2726000 steps.
>>
>> After restarting again with firsttimesteps 2726000
>>
>> It seems like it started after 2726000 steps & finished at 12726000 step--0000000000001c818a05aa4195f3--
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