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Potential energy functions
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NAMD 2.7 User's Guide
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Example of a Session
Contents
Index
Force Field Parameters
Subsections
Potential energy functions
Bonded potential energy terms
Nonbonded potential energy terms
Non-bonded interactions
Van der Waals interactions
Electrostatic interactions
Non-bonded force field parameters
PME parameters
Full direct parameters
Water Models
Water model parameters
Constraints and Restraints
Bond constraint parameters
Harmonic restraint parameters
Fixed atoms parameters
Extra bond, angle, and dihedral restraints
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